Eric Bullinger
PD Dr. sc. techn. Eric Bullinger
Institute for Automation Engineering (IFAT)
Chair of Systems Theory and Control Engineering
2023
Peer-reviewed journal article
Generalization of navigation memory in honeybees
Bullinger, Eric; Greggers, Uwe; Menzel, Randolf
In: Frontiers in behavioral neuroscience - Lausanne : Frontiers Research Foundation, Bd. 17 (2023), insges. 17 S.
2019
Peer-reviewed journal article
Response to IL-6 trans- and IL-6 classic signalling is determined by the ratio of the IL-6 receptor α to gp130 expression - fusing experimental insights and dynamic modelling
Reeh, Heike; Rudolph, Nadine; Billing, Ulrike; Christen, Henrike; Streif, Stefan; Bullinger, Eric; Schliemann-Bullinger, Monica; Findeisen, Rolf; Schaper, Fred; Huber, Heinrich; Dittrich, Anna
In: Cell communication and signaling - London : Biomed Central - Vol. 17.2019, 1, Art. 17:46, insgesamt 21 Seiten
2018
Book chapter
Model predictive control for aircraft load alleviation - opportunities and challenges
Kopf, Michael; Bullinger, Eric; Giesseler, Hans-Gerd; Adden, Stephan; Findeisen, Rolf
In: 2018 Annual American Control Conference (ACC) , 2018 - [Piscataway, NJ] : IEEE, S. 2417-2424 [Konferenz: 2018 Annual American Control Conference, ACC, Milwaukee, USA, 27-29 June 2018]
2017
Peer-reviewed journal article
Mathematical 3D modelling and sensitivity analysis of multipolar radiofrequency ablation in the spine
Himmel, Janine; Himmel, Andreas; Bullinger, Eric; Haeseler, von Friedrich; Skalej, Martin; Findeisen, Rolf
In: Mathematical biosciences - New York, NY : American Elsevier, Bd. 284 (2017), S. 51-60
2016
Book chapter
The experimental side of parameter estimation
Schliemann-Bullinger, Monica; Fey, Dirk; Bastogne, Thierry; Findeisen, Rolf; Scheurich, Peter; Bullinger, Eric
In: Uncertainty in Biology , 1st ed. 2016 - Cham : Springer ; Geris, Liesbet, S. 127-154 - (Studies in mechanobiology, tissue engineering and biomaterials; volume 17)
Peer-reviewed journal article
Monotonicity of kinetic proofreading
Kallies, Christian; Schliemann-Bullinger, Monica; Findeisen, Rolf; Lucia, Sergio; Bullinger, Eric
In: IFAC-PapersOnLine / Internationale Förderung für Automatische Lenkung - Frankfurt : Elsevier, Bd. 49 (2016), Heft 26, S. 306-311 [Kongress: Foundations of Systems Biology in Engineering, FOSBE 2016, Magdeburg, Germany, 9-12 October, 2016]
A set-based optimal control approach for pharmacokinetic/pharmacodynamic drug dosage design
Lucia, Sergio; Schliemann-Bullinger, Monica; Findeisen, Rolf; Bullinger, Eric
In: IFAC-PapersOnLine / Internationale Förderung für Automatische Lenkung - Frankfurt : Elsevier, Bd. 49 (2016), Heft 7, S. 797-802 [Kongress: 11th IFAC Symposium on Dynamics and Control of Process SystemsIncluding Biosystems, Trondheim, Norway, 6-8 June, 2016]
Activation of D2 autoreceptors alters cocaine-induced locomotion and slows down local field oscillations in the rat ventral tegmental area
Koulchitsky, Stanislav; Delairesse, Charlotte; Beeken, Thom; Monteforte, Alexandre; Dethier, Julie; Quertemont, Etienne; Findeisen, Rolf; Bullinger, Eric; Seutin, Vincent
In: Neuropharmacology - Amsterdam [u.a.] : Elsevier Science, Bd. 108 (2016), S. 120-127
2015
Peer-reviewed journal article
A model-based pharmacokinetics characterization method of engineered nanoparticles for pilot studies
Tylcz, Jean-Baptiste; Bastogne, T.; Benachour, H.; Bechet, D.; Bullinger, Eric; Garnier, H.; Barberi-Heyob, M.
In: IEEE transactions on nanobioscience / Institute of Electrical and Electronics Engineers - New York, NY : IEEE, Bd. 14 (2015), Heft 4, S. 368-377
Simple and efficient moving horizon estimation based on the fast gradient method
Morabito, Bruno; Kögel, Markus; Bullinger, Eric; Pannocchia, Gabriele; Findeisen, Rolf
In: IFAC-PapersOnLine / Internationale Förderung für Automatische Lenkung - Frankfurt : Elsevier, Bd. 48 (2015), Heft 23, S. 428-433 [Kongress: 5th IFAC Conference on Nonlinear Model Predictive Control NMPC 2015, Seville, Spain, 17-20 September 2015]
Unraveling apoptosis signalling using linear control methods - linking the loop gain to reverting the decision to undergo apoptosis
Schliemann-Bullinger, Monica; Readman, Mark C.; Kalamatianos, Dimitrios; Findeisen, Rolf; Bullinger, Eric
In: IFAC-PapersOnLine / Internationale Förderung für Automatische Lenkung - Frankfurt : Elsevier, Bd. 48 (2015), Heft 8, S. 954-959
2014
Abstract
Changed state - changed brain - shift of the dominant frequency of theta oscillations in the rat VTA during stereotypic locomotion
Koulchitsky, Stanislav; Beeken, Thom; Monteforte, Alexandre; Dethier, Julie; Quertemont, Etienne; Findeisen, Rolf; Bullinger, Eric; Seutin, Vincent
In: Belgian Brain Council 2014 Modulating the Brain
Peer-reviewed journal article
Cell invasion in the spheroid sprouting assay - a spatial organisation analysis adaptable to cell behaviour
Blacher, Silvia; Erpicum, Charlotte; Lenoir, Bénédicte; Paupert, Jenny; Moraes, Gustavo; Ormenese, Sandro; Bullinger, Eric; Noel, Agnès
In: PLOS ONE - San Francisco, California, US : PLOS, Bd. 9 (2014), Heft 5, Artikel e97019, insges. 10 S.
2013
Peer-reviewed journal article
Review of Computational Systems Biology of Cancer
Bullinger, Eric; Schliemann, Monica
In: BioMedical Engineering OnLine, Springer Science and Business Media LLC, Bd. 12, Heft 1, S. 76
2012
Book chapter
Robustness-based model validation of an apoptosis signalling network model
Schliemann, Monica; Findeisen, Rolf; Bullinger, Eric
In: 16th IFAC Symposium on System Identification , [Online-Ausg.] - Elsevier . - 2012, S. 930-935 Kongress: IFAC Symposium on System Identification 16 Brüssel, Belgium 2012.07.11-13
Peer-reviewed journal article
Global Analysis of Dynamical Decision-Making Models through Local Computation around the Hidden Saddle
Trotta, Laura; Bullinger, Eric; Sepulchre, Rodolphe
In: PLoS ONE, Public Library of Science (PLoS), Bd. 7, Heft 3, S. e33110
2011
Peer-reviewed journal article
Heterogeneity reduces sensitivity of cell death for TNF-stimuli
Schliemann, Monica; Bullinger, Eric; Borchers, Steffen; Allgöwer, Frank; Findeisen, Rolf; Scheurich, Peter
In: BMC systems biology - London : BioMed Central - Vol. 5, 2012, Art. 204, insgesamt 11 S.
Feedback control strategies for spatial navigation revealed by dynamic modelling of learning in the Morris water maze
Fey, Dirk; Commins, Sean; Bullinger, Eric
In: Journal of Computational Neuroscience, Springer Science and Business Media LLC, Bd. 30, Heft 2, S. 447-454
2010
Book chapter
Identification of biochemical reaction networks using a parameter-free coordinate system
Frey, Dirk; Findeisen, Rolf; Bullinger, Eric
In: Control theory and systems biology - Cambridge, Mass. [u.a.] : MIT Press . - 2010, S. 297-316
Delayed decision-making in bistable models
Trotta, Laura; Sepulchre, Rodolphe; Bullinger, Eric
In: 49th IEEE Conference on Decision and Control (CDC), IEEE, S. 816-821
Peer-reviewed journal article
Review of three Recent Books on the Boundary of Bioinformatics and Systems Biology
Bullinger, Eric; Schliemann, Monica
In: BioMedical Engineering OnLine, Springer Science and Business Media LLC, Bd. 9, Heft 1, S. 33
Editorial for Special Issue on ‘Robustness in systems biology: Methods and applications’
Yue, Hong; Bullinger, Eric
In: International Journal of Robust and Nonlinear Control, Wiley, Bd. 20, Heft 9, S. 1015-1016
2009
Book chapter
Systems Biology Approaches to the Study of Apoptosis
Huber, Heinrich; Bullinger, Eric; Rehm, Markus
In: Essentials of Apoptosis, Humana Press, S. 283-297
Identification of Biochemical Reaction Networks Using a Parameter-Free Coordinate System
Fey, Dirk; Findeisen, Rolf; Bullinger, Eric
In: Control Theory and Systems Biology, The MIT Press, S. 297-316
Peer-reviewed journal article
A Dissipative Approach to the Identification of Biochemical Reaction Networks
Fey, Dirk; Bullinger, Eric
In: IFAC Proceedings Volumes, Elsevier BV, Bd. 42, Heft 10, S. 1259-1264
2008
Book chapter
High density resolution synchrotron radiation based x-ray microtomography (SR μCT) for quantitative 3D-morphometrics in zoological sciences
Nickel, Michael; Hammel, Jörg U.; Herzen, Julia; Bullinger, Eric; Beckmann, Felix
In: SPIE Proceedings, SPIE, Bd. 7078, S. 70781W, Developments in X-Ray Tomography VI
Parameter estimation in kinetic reaction models using nonlinear observers facilitated by model extensions
Fey, Dirk; Findeisen, Rolf; Bullinger, Eric
In: In . - 2008, S. 313-318 Kongress: IFAC World Congress 17 Seoul 2008.07.06-11
Peer-reviewed journal article
Special Section on Machine Intelligence Approaches to Systems Biology
Fogel, Gary B.; Bullinger, Eric; Su, Shun-Feng; Azuaje, Francisco
In: IEEE Transactions on Systems, Man, and Cybernetics, Part B (Cybernetics), Institute of Electrical and Electronics Engineers (IEEE), Bd. 38, Heft 1, S. 2-4
Parameter estimation in kinetic reaction models using nonlinear observers facilitated by model extensions
Fey, Dirk; Findeisen, Rolf; Bullinger, Eric
In: IFAC Proceedings Volumes, Elsevier BV, Bd. 41, Heft 2, S. 313-318
The rôle of control and system theory in systems biology
Wellstead, Peter; Bullinger, Eric; Kalamatianos, Dimitrios; Mason, Oliver; Verwoerd, Mark
In: Annual Reviews in Control, Elsevier BV, Bd. 32, Heft 1, S. 33-47
Original article in peer-reviewed national journal
Identifikation biochemischer Reaktionsnetzwerke - ein beobachterbasierter Ansatz - Identification of biochemical reaction networks
Bullinger, Eric; Fey, Dirk; Farina, Marcello; Findeisen, Rplf
In: Automatisierungstechnik - Berlin : ˜deœ Gruyter, Oldenbourg, Bd. 56 (2008), Heft 5, S. 269-279
2007
Peer-reviewed journal article
Approximations and their consequences for dynamic modelling of signal transduction pathways
Millat, Thomas; Bullinger, Eric; Rohwer, Johann; Wolkenhauer, Olaf
In: Mathematical Biosciences, Elsevier BV, Bd. 207, Heft 1, S. 40-57
Response to bistability in apoptosis: Roles of Bax, Bcl-2, and mitochondrial permeability transition pores
Eissing, T.; Waldherr, S.; Allgöwer, F.; Scheurich, P.; Bullinger, E.
In: Biophysical Journal, Vol. 92, 2007, Issue 9, S. 3332-3334, ISSN 00063495, 10.1529/biophysj.106.100362
Steady state and (bi-) stability evaluation of simple protease signalling networks
Eißing, T.; Waldherr, S.; Allgöwer, F.; Scheurich, P.; Bullinger, E.
In: BioSystems, Vol. 90, 2007, Issue 3, S. 591-601, ISSN 03032647, 10.1016/j.biosystems.2007.01.003
Original article in peer-reviewed periodical-type series
System and control theory furthers the understanding of biological signal transduction
Bullinger, Eric; Findeisen, Rolf; Kalamatianos, Dimitrios; Wellstead, Peter
In: Biology and control theory: current challenges - Berlin : Springer , 2007, S. 123-135 - (Lecture notes in control and information sciences; 357)
2006
Book chapter
Results towards identifiability properties of biochemical reaction networks
Farina, Marcello; Findeisen, Rolf; Bullinger, Eric; Bittanti, Sergio; Allgöwer, Frank; Wellstead, Peter
In: 45th IEEE Conference on Decision and Control, 2006 - Piscataway, NJ : IEEE Service Center, S. 2104-2109 Kongress: CDC 45 San Diego, Calif. 2006.12.13-15
Peer-reviewed journal article
Functional morphology of Tethya species (Porifera): 2. Three-dimensional morphometrics on spicules and skeleton superstructures of T. minuta
Nickel, Michael; Bullinger, Eric; Beckmann, Felix
In: Zoomorphology, Springer Science and Business Media LLC, Bd. 125, Heft 4, S. 225-239
Wilkinson Darren: Stochastic Modelling for Systems Biology - Boca Raton, FL, USA: Chapman & Hall/CRC. 254 pages, ISBN 1-58488-540-8, USD 79.95.
Bullinger, Eric
In: BioMedical Engineering OnLine, Springer Science and Business Media LLC, Bd. 5, Heft 1
Article in conference proceedings
Sensitivity analysis of programmed cell death and implications for crosstalk phenomena during tumor necrosis factor stimulation
Eissing, T.; Waldherr, S.; Gondro, C.; Bullinger, E.; Sawodny, O.; Allgöwer, F.; Scheurich, P.; Sauter, T.
In: Proceedings of the IEEE International Conference on Control Applications, 2006, S. 1746-1752, 10.1109/CACSD-CCA-ISIC.2006.4776905
System and control theory allows to further understanding of biological signal transduction
Bullinger, Eric; Findeisen, Rolf; Kalamatianos, Dimitrios; Wellstead, Peter
In: Workshop CNRS-NSF Biology and Control Theory - Toulouse . - 2006, insges. 4 S. Kongress: Workshop CNRS-NSF Biology and control theory Toulouse, France 2006.04.24-25
Relating cross gramian and sensitivity analysis in systems biology
Streif, Stefan Stefan; Findeisen, Rolf; Bullinger, Eric
In: 17th International Symposium on Mathematical Theory of Networks and Systems, MTNS 2006 - Kyoto, S. 437-442 Kongress: MTNS 2006 17 Kyoto, Japan 2006.07.24-28
2005
Peer-reviewed journal article
Adaptive-tracking for nonlinear higher relative degree systems
Bullinger, Eric; Allgöwer, Frank
In: Automatica, Elsevier BV, Bd. 41, Heft 7, S. 1191-1200
Robustness properties of apoptosis models with respect to parameter variations and intrinsic noise
Eißing, T.; Allgöwer, F.; Bullinger, E.
In: IEE Proceedings - Systems Biology, Institution of Engineering and Technology (IET), Bd. 152, Heft 4, S. 221
2004
Peer-reviewed journal article
A Benchmark for Methods in Reverse Engineering and Model Discrimination: Problem Formulation and Solutions
Kremling, Andreas; Fischer, Sophia; Gadkar, Kapil; Doyle, Francis J.; Sauter, Thomas; Bullinger, Eric; Allgöwer, Frank; Gilles, Ernst D.
In: Genome Research, Cold Spring Harbor Laboratory, Bd. 14, Heft 9, S. 1773-1785
Integration und Interaktion: Möglichkeiten des Einsatzes von Notebooks und Internet in der regelungstechnischen Lehre (Integration and Interaction: Opportunities of Using Notebooks and Internet for Teaching in Control Engineering)
Schumm, Peter; Bullinger, Eric; Schweickhardt, Tobias; Allgöwer, Frank
In: at - Automatisierungstechnik, Walter de Gruyter GmbH, Bd. 52, Heft 2, S. 81-89
Bistability Analyses of a Caspase Activation Model for Receptor-induced Apoptosis
Eissing, Thomas; Conzelmann, Holger; Gilles, Ernst D.; Allgöwer, Frank; Bullinger, Eric; Scheurich, Peter
In: Journal of Biological Chemistry, Elsevier BV, Bd. 279, Heft 35, S. 36892-36897
Reduction of mathematical models of signal transduction networks: simulation-based approach applied to EGF receptor signalling
Conzelmann, H.; Sauter, T.; Gilles, E.D.; Allgöwer, F.; Saez-Rodriguez, J.; Bullinger, E.
In: Systems Biology, Institution of Engineering and Technology (IET), Bd. 1, Heft 1, S. 159-169
2003
Peer-reviewed journal article
A note on stability, robustness and performance of output feedback nonlinear model predictive control
Imsland, Lars; Findeisen, Rolf; Bullinger, Eric; Allgöwer, Frank; Foss, Bjarne A.
In: Journal of Process Control, Elsevier BV, Bd. 13, Heft 7, S. 633-644
An Approach for Dividing Models of Biological Reaction Networks into Functional Units
Ederer, Michael; Sauter, Thomas; Bullinger, Eric; Gilles, Ernst-Dieter; Allgöwer, Frank
In: SIMULATION, SAGE Publications, Bd. 79, Heft 12, S. 703-716
2002
Peer-reviewed journal article
ON DERIVING A HYBRID MODEL FOR CARBOHYDRATE UPTAKE IN ESCHERICHIA COLI
Bullinger, Eric; Sauter, Thomas; Allgöwer, Frank; Gilles, Ernst-Dieter
In: IFAC Proceedings Volumes, Elsevier BV, Bd. 35, Heft 1, S. 19-24
2000
Peer-reviewed journal article
Artifact-Tolerant Controllers for Automatic Drug Delivery in Anesthesia
Frei, Christian W.; Bullinger, E.; Gentilini, Andrea; Glattfelder, Adolf H.; Sieber, T.; Zbinden, A. M.
In: Critical Reviews™ in Biomedical Engineering, Begell House, Bd. 28, Heft 1-2, S. 187-192